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Liliya Yatsunyk

James H. Hammons Chair of Chemistry

Chemistry & Biochemistry

Contact

  1. Phone: (610) 328-8558
  2. Science Center 286
  3. Science Center 286

Links

Affiliations: Chemistry & Biochemistry

Research interests: non-canonical DNA structures, biophysical characterization and interaction with small molecule ligands

Liliya Yatsunyk

Education

Postdoctoral Fellowship, BMBCB, Northwestern University
Ph.D., Chemistry, University of Arizona
Honors Diploma, Chemistry, Chernivtsi State University, Ukraine

Teaching

I teach Inorganic Chemistry (Chem 56), an advanced seminar Topics in Bioinorganic Chemistry (Chem 106), and an advanced seminar on DNA Nanotechnology (Chem 112). In addition, I teach Advanced Integrated Experimental Chemistry (Chem 66), a General Chemistry Honors Course (Chem 10HN) as well as laboratories in General (Chem 10) and Biological (Chem 38) Chemistry.

Research

My laboratory focuses on non-canonical DNA structures, G-quadruplexes, i-motifs, and tandem repeats. Such sequences are found at telomeres and oncogene promoters, among other regions. Small molecule ligands strongly affect fold and stability of non-canonical DNA and may act as therapeutics for cancer and other diseases. We strive to determine the structural details of DNA and DNA-ligand complexes and understand the reasons behind structural diversity of DNA. Our favorite techniques include X-ray crystallography, UV-vis and fluorescence spectroscopies, circular dichroism (CD), fluorescence resonance energy transfer (FRET), and gel electrophoresis. We closely collaborate with Biologists to address biologically relevant DNA-centered questions.

Recent Publications (Swarthmore undergraduates underlined)

  1. Beseiso, D.; Chen, E. V.; McCarthy, S. E.; Gallagher, E. P.; Miao, J.; and Yatsunyk, L. A. “The First Crystal Structures of Hybrid and Parallel Four-Tetrad Intramolecular G-Quadruplexes” Nucleic Acids Res. Resubmitted Jan 2022

  2. Li, K.; Yatsunyk, L. A.; Neidle, S. Water spines and networks in G-quadruplex structures Nucleic Acids Res. 2020, 49(11), 519-528

  3. Lin, L. Y.;  McCarthy, S.; Powell, B. M.; Manurung, Y.; Xiang I. M.; Dean, W. D.; Chaires, B.; Yatsunyk, L. A. Biophysical and X-ray structural studies of the (GGGTT)3GGG G-quadruplex in complex with N-methyl mesoporphyrin IX PLOS ONE, 2020, 15(11): e0241513.

  4. Johnson, F. B.; and Yatsunyk, L. A. G-quadruplexes in fibrotic scars may open new therapeutic avenues for wound healing FEBS Let., 2019, 594, 19-20.

  5. Yett, A.; Lin L. Y.; Beseiso, D.; Miao, J., and Yatsunyk, L. A. N-methyl mesoporphyrin IX as a highly selective light-up probe for G-quadruplex DNA. J. Porphyr. Phthalocya. Contribution to Women in Porphyrin Sciences Special Issue (* equal contributions of all authors), 2019, 23, 1195-1215.