Chemistry
Caroline A. Burkhard, Laboratory InstructorBurkhard, C., G. Luther III, and D. Ruppel. 1998. Reactivity of dissolved Mn(III) complexes and Mn(IV) species with reductants: Mn redox chemistry. In Mineral water interfacial reactions: Kinetics and mechanisms, edited by D. Sparks and T.Grundl, 265-280. Washington, DC: American Chemical Society. Find this resource Kathleen P. Howard, Associate ProfessorHoward, K.P., P.A. Nguyen '08, C.S. Soto, A. Polishchuk, G.A. Caputo, C.D. Tatko, C. Ma, Y. Ohigashi, L.H. Pinto and W.F. DeGrado. 2008. pH-Induced conformational change of the influenza M2 protein C-terminal domain. Biochemistry 47 (38): 9934-9936. Find this resource Howard, K.P., N. Negrey '07, P. Nguyen '08, C. Tatko, and W. DeGrado. 2007. EPR spectroscopy of the C-terminal domain of the M2 protein from influenza a virus. Biophysical Journal Suppl. S: 74A. Find this resource Howard, K.P. and B. Zee '08. 2007. Probing the phase behavior of membrane bilayers using 31P NMR spectroscopy. In Modern NMR spectroscopy in education, edited by D. Rovnyak and R. Stockland, Jr. Washington, DC: American Chemical Society. Find this resource Howard, K.P. and K.C. Duong-Ly '05. 2005. EPR spectroscopy of a spin-labeled M2TM in lipid bilayers. Biophysical Journal 88 (1): 78A. Abstract. Find this resource Howard, K. P., W. Liu, E. Crocker, V. Nanda, J. Lear, W. F. DeGrado, and S. O. Smith. 2005. Rotational orientation of monomers within a designed homo-oligomer transmembrane helical bundle. Protein Science 14 (4): 1019-1024. Find this resource Howard, K.P., K.C. Duong-Ly '05, V. Nanda, and W.F. DeGrado. 2005. The Conformation of the pore region of the M2 proton channel depends on lipid bilayer environment. Protein Science 14 (4): 856-861. Find this resource Howard, K.P., J.D. Lear, and W.F. DeGrado. 2002. Sequence determinants of the energetics of folding of a transmembrane four-helix-bundle protein. Proceedings of the National Academy of Sciences 99 (13): 8568-8572. Find this resource Howard, K.P., J.D. Lear, and W.F. DeGrado. 2002. Transmembrane interface of the M2 protein from Influenza A virus. Biophysical Journal 82 (1): 529. Find this resource Howard, K.P., M.L. Mangels, A.C. Harper, A.I. Smirnov, and G.A. Lorigan. 2001. Investigating magnetically aligned phospholipids bilayers with ERP spectroscopy at 94 GHz. Journal of Magnetic Resonance 151 (2): 253-259. Find this resource Howard, K.P., T.B. Cardon, E.K. Tiburu, A. Padmanabhan, and G.A. Lorigan. 2001. Magnetically aligned phospolipid bilayers at the parallel and perpendicular orientations for X-band spin-label EPR studies. Journal of American Chemical Society 123 (12): 2913-2914. Find this resource Howard, K.P., M.A. Parker, and V. King. 2001. Nuclear magnetic resonance study of doxorubicin binding to cardiolipin containing magnetically oriented phospholipid bilayers. Biochimica Et Biophysica Acta-Biomembranes 1514 (2): 206-216. Find this resource Howard, K.P. and M. Parker. 2000. Doxorubicin binding to cardiolipin containing magnetically oriented phospholipid bilayers. Biophysical Journal 78 (1): 363. Find this resource Howard, K.P., V. King, and M. Parker. 2000. Pegylation of magnetically oriented lipid bilayers. Journal of Magnetic Resonance 142 (1): 177-182. Find this resource Howard, K.P., M.L. Mangels, T.B. Cardon, A.C. Harper, and G.A. Lorigan. 2000. Spectroscopic characterization of spin-labeled magnetically oriented phospolipid bilayers by ERP spectroscopy. Journal of American Chemical Society 122 (29): 7052-7058. Find this resource Howard, K.P. and K. Lloyd. 2000. Studying transmembrane helical peptides in magnetically oriented phospholipid bylayers. Biophysical Journal 78 (1): 2434. Find this resource Howard, K.P. 2000. Thermodynamics of DNA duplex formation: A biophysical chemistry laboratory experiment. Journal of Chemical Education 77 (11): 1469-1471. Find this resource Howard, K.P., S.M. Garber, and G.A. Lorigan. 1999. Magnetically oriented phospholipid bilayers for spin label ERP studies. Journal of American Chemical Society 121 (13): 3240-3241. Find this resource J. Matthew Hutchison, Visiting Assistant ProfessorHutchison, J.M., R.R. O'Hern, T.A. Stephenson, Y.V. Suleimanov, and A.A. Buchachenko. 2008. Theoretical and experimental studies of collision-induced electronic energy transfer from v=0–3 of the E(0g+) ion-pair state of Br2: Collisions with He and Ar. Journal of Chemical Physics 128 (18): 184311. Find this resource Hutchison, J.M., B.R. Carlisle '05, and T.A. Stephenson. 2006. Rovibrational resonance effects in collision-induced electronic energy transfer: I2(E,v=0-2)+CF4. Journal of Chemical Physics 125 (19): 194313. Find this resource Stephen T. Miller, Assistant ProfessorMiller, S.T., C.S. Pereira, J.R. McAuley '08, M.E. Taga, and K.B. Xavier. 2008. Sinorhizobium meliloti, a bacterium lacking the autoinducer-2 (AI-2) synthase, responds to AI-2 supplied by other bacteria. Molecular Microbiology 70 (5): 1223-1235. Find this resource Miller, S.T., K.B. Xavier, W.Y. Lu, J.H. Kim '07, J. Rabinowitz, I. Pelczer, M.F. Semmelhack, and B.L. Bassler. 2007. Phosphorylation and processing of the quorum-sensing molecule autoinducer-2 in enteric bacteria. ACS Chemical Biology 2 (2): 128-136. Find this resource Miller, S.T., M.B. Neiditch, M.J. Federle, B.L. Bassler and F.M. Hughson. 2005. Regulation of LuxPQ Receptor Activity by the Quorum-Sensing Signal Autoinducer-2. Molecular Cell 18 (5): 507-518. Find this resource Robert S. Paley, ProfessorPaley, R.S., S.M. Koskowich '07 , W.C. Johnson '07, and P.R. Rablen. 2008. Computational modeling of a stereoselective epoxidation: Reaction of carene with peroxyformic acid. Journal of Organic Chemistry 73 (9): 3492-3496. Find this resource Paley, R.S., J.M. Liu '00, D.R. Lichtenstein '02, V.L. Knoedler '01, T.T. Sanan '03, D.J. Adams '03, J. Fernandez, and P.R. Rablen. 2003. Simultaneous and stereoselective formation of planar and axial chiralities in enantiopure sulfinyl iron diene complexes. Organic Letters 5 (3): 309-312. Find this resource Paley, R. S. 2002. Enantiomerically pure planar chiral organometallic complexes via facially selective π-complexation. Chemical Reviews 102 (5): 1493-1523. Find this resource Paley, R.S., L.A. Estroff, J.M. Gauguet, D.K. Hunt, and R.C. Newlin. 2000. Enantiopure ŋ4-(1-sulfinyldiene)iron(0) tricarbonyl complexes as templates for carbocycle construction via ring-closing metathesis. Organic Letters 2 (3): 365-368. Find this resource Paley, R.S., L.A. Estroff, D.J. McCulley, L.A. Martínez-Cruz, A.J.Sánchez, and F.H. Cano. 1998. Diastereoselective allylations of enantiopure 3-and 4-substituted ŋ4-(1Z)-(sulfinyldienal)iron(0) tricarbonyl complexes. Organometalllics 17 (9): 1841-1849. Find this resource Robert F. Pasternack, ProfessorPasternack, R.F., S.P. Sibley, K. Sosinsky, L.E. Gulian, and E.J. Gibbs. 2008. Probing the mechanism of insulin aggregation with added metalloporphyrins. Biochemistry 47 (9): 2858-2865. Find this resource Pasternack, R.F., E.J. Gibbs, S. Sibley, L. Woodard, P. Hutchinson, J. Genereux '01, and K. Kristian '04. 2006. Formation kinetics of insulin-based amyloid gels and the effect of added metalloporphyrins. Biophysical Journal 90 (3): 1033-1042. Find this resource Pasternack, R.F., E. Gibbs, and K.E. Kristian. 2004. An Interdisciplinary laboratory project based on insulin gels as models of amyloid plaques. Abstracts of Papers of the American Chemical Society 227: U672. Find this resource Pasternack, R.F., L.M. Scolaro, and A. Romeo. 2004. Tuning porphyrin/DNA supramolecular assemblies by competitive binding. Journal of the American Chemical Society 126 (23): 7178-7179. Find this resource Pasternack, R.F. 2003. Circular dichroism and the interactions of water soluble porphyrins with DNA: A minireview. Chirality 15 (4): 329-332. Find this resource Pasternack, R.F., E.J. Gibbs, D. Bruzewicz, D. Stewart, and K.S. Engstrom. 2002. Kinetics of disassembly of a DNA-bound porphyrin supramolecular array. Journal of the American Chemical Society 124 (14): 3533-3539. Find this resource Pasternack, R.F., S. Ewen, A. Rao, A.S. Meyer, M.A. Freedman, P.J. Collings, S.L. Frey, M.C. Ranen, and J. de Paula. 2001. Interactions of copper(II) porphyrins with DNA. Inorganica Chimica Acta 317 (1-2): 59-71. Find this resource Pasternack, R.F., C. Fleming, S. Herring, P.J. Collings, J. de Paula, G. DeCastro, and E.J. Gibbs. 2000. Aggregation kinetics of extended porphyrin and cyanine dye assemblies. Biophysical Journal 79 (1): 550-560. Find this resource Pasternack, R.F., K. Kano, K. Fukuda, H. Wakami, and R. Nishiyabu. 2000. Factors influencing self-aggregation tendencies of cationic porphyrins in aqueous solution. Journal of American Chemical Society 122 (31): 7494-7502. Find this resource Pasternack, R.F. and M. Freedman. 2000. The Effect of substrate and template rigidity on metalloporphyrin aggregation. The Chemist 77: 25. Find this resource Pasternack, R.F., D. Delmarre, R. Méallet-Renault, and C. Bied-Charreton. 1999. Incorporation of water-soluble porphyrins in sol-gel matrices and application to pH sensing. Analytica Chimica Acta 401 (1-2): 125-128. Find this resource Pasternack, R.F., P.J. Collings, E.J. Gibbs, T.E. Starr, O. Vafek, C. Yee, and L.A. Pomerance . 1999. Resonance light scattering and its application in determining the size, shape, and aggregation number for supramolecular assemblies of chromophores. Journal of Physical Chemistry B 103 (40): 8474-8481. Find this resource Pasternack, R.F., E.J. Gibbs, P.J. Collings, J. de Paula, L.C. Turzo, and A. Terracina. 1998. A Nonconventional approach to supramolecular formation dynamics. The Kinetics of assembly of DNA-bound porphyrins. Journal of the American Chemical Society 120 (24): 5873-5878. Find this resource Pasternack, R.F., J.I. Goldsmith, S. Szép, and E.J. Gibbs. 1998. A Spectroscopic and thermodynamic study of porphyrin/DNA supramolecular assemblies. Biophysical Journal 75 (2): 1024-1031. Find this resource Pasternack, R.F., J. Parkash, J.H. Robblee, J. Agnew, E. Gibbs, P.J. Collings, and J. de Paula. 1998. Depolarized resonance light scattering by porphyrin and chlorophyll a aggregates. Biophysical Journal 74 (4): 2089-2099. Find this resource Paul R. Rablen, Associate ProfessorRablen, P.R., S.M. Koskowich '07 , W.C. Johnson '07, and R.S. Paley. 2008. Computational modeling of a stereoselective epoxidation: Reaction of carene with peroxyformic acid. Journal of Organic Chemistry 73 (9): 3492-3496. Find this resource Rablen, P.R., E. Fouts '07, and E. Gooding. 2007. The role of a salt bridge in trpzip beta-hairpin formation. Biophysical Journal Suppl. S: 209A. Find this resource Rablen, P.R. and D.C. Merrer. 2005. Dichlorocarbene addition to cyclopropenes: A computational study. Journal of Organic Chemistry 70 (5): 1630-1635. Find this resource Rablen, P.R. and K.H. Bentrup '01. 2003. Are the enolates of amides and esters stabilized by electrostatics?. Journal of the American Chemical Society 125 (8): 2142-2147. Find this resource Rablen, P.R., R.S. Paley, J.M. Liu '00, B.R. Lichtenstein '02, V.L. Knoedler '01, T.T. Sanan '03, D.J. Adams '03, and J. Fernandez. 2003. Simultaneous and stereoselective formation of planar and axial chiralities in enantiopure sulfinyl iron diene complexes. Organic Letters 5 (3): 309-312. Find this resource Rablen, P.R., R. Taboada, G.G. Ordonio, A.J. Ndakala, and A.R. Gowell. 2002. Directed ring-opening of 1,5-dioxaspiro[3.2]hexanes: Selective formation of 2,2-disubstituted oxetanes. Journal of Organic Chemistry 68 (4): 1480-1488. Find this resource Rablen, P.R., A. DerHovanessian, and A. Jain. 2000. Ab initio and density functional calculations of 19F NMR chemical shifts for models of carbonic anhydrase inhibitors. Journal of Physical Chemistry A 104 (25): 6056-6061. Find this resource Rablen, P.R. 2000. Computational analysis of the solvent effect on the barrier to rotation about the conjugated C-N bond in methyl N,N-dimethylcarbamate. Journal of Organic Chemistry 65 (23): 7930-7937. Find this resource Rablen, P.R. 2000. Is the acetate anion stabilized by resonance or electrostatics? A systematic structural comparison. Journal of the American Chemical Society 122 (2): 357-368. Find this resource Rablen, P.R., L.A. Paquette, and W.T. Borden. 2000. Why Doesn't all-trans-1,2,3,4,5,6-hexaspiro(THF)cyclohexane complex metal ions?. Journal of Organic Chemistry 65 (26): 9180-9185. Find this resource Rablen, P.R., S.A. Pearlman, and J. Finkbiner. 1999. A Comparison of density functional methods for the estimation of proton chemical shifts with chemical accuracy. Journal of Physical Chemistry A 103 (36): 7357-7363. Find this resource Rablen, P.R., R.W. Hoffmann, D.A. Hrovat, and W.T. Borden. 1999. Is hyperconjugation responsible for the "gauche effect" in 1-fluoropropane and other 2-substituted-1-fluoroethanes?. Journal of the Chemical Society-Perkin Transactions 2 (8): 1719-1726. Find this resource Rablen, P.R., A. DerHovanessian, J.B. Doyon, A. Jain, and A.M. Sapse. 1999. Models of F·H contacts relevant to the binding of fluoroaromatic inhibitors to carbonic anhydrase II. Organic Letters 1 (9): 1359-1362. Find this resource Rablen, P.R., D.A. Miller, V.R. Bullock, P.H. Hutchinson, and J.A. Gorman. 1999. Solvent effects on the barrier to C-N bond rotation in N,N-Dimethylaminoacrylonitrile. Journal of the American Chemical Society 121 (1): 218-226. Find this resource Rablen, P.R., S.A. Pearlman, and D.A. Miller. 1999. Solvent effects on the barrier to C-N bond rotation in N,N-Dimethylaminoacrylonitrile: Modeling by reaction field theory and by Monte Carlo simulations. Journal of the American Chemical Society 121 (1): 227-237. Find this resource Rablen, P.R., J.W. Lockman, and W.L. Jorgensen. 1998. Ab initio study of hydrogen-bonded complexes of small organic molecules with water. Journal of Physical Chemistry A 102 (21): 3782-3797. Find this resource Rablen, P.R., C.M. Hadad, and K.B. Wiberg. 1998. C-O and C-S bonds: Stability, bond dissociation energies, and resonance stabilization. Journal of Organic Chemistry 63 (24): 8668-8681. Find this resource Rablen, P.R., A.D. Richardson, K. Hedberg, and K.B. Wiberg. 1998. Internal hydrogen bonding in gaseous 3-aminoacrolein: An electron-diffraction investigation augmented by ab initio calculations of its molecular structure and conformational composition. Journal of Molecular Structure 445 (1-3): 1-11. Find this resource Rablen, P.R. and K.B. Wiberg. 1998. Substituent effects. 7. Phenyl derivatives. When is a fluorine a pi-donor?. Journal of Organic Chemistry 63 (11): 3722-3730. Find this resource Thomas A. Stephenson, ProfessorStephenson, T.A., J.M. Hutchison, R.R. O'Hern '06, Y.V. Suleimanov, and A.A. Buchachenko. 2008. Theoretical and experimental studies of collision-induced electronic energy transfer from v=0–3 of the E(0g+) ion-pair state of Br2: Collisions with He and Ar. Journal of Chemical Physics 128 (18): 184311. Find this resource Stephenson, T.A., I.B. Pollack, Y. Lei and M.I. Lester. 2006. Electronic quenching of OH A2Σ+ radicals in collisions with molecular hydrogen. Chemical Physics Letters 421 (4-6): 324-328. Find this resource Stephenson, T.A., J.M. Hutchison, and B.R. Carlisle '05. 2006. Rovibrational resonance effects in collision-induced electronic energy transfer: I2(E,v=0-2)+CF4. Journal of Chemical Physics 125 (19): 194313. Find this resource Stephenson, T.A., et al. 2005. Kinetic and mechanistic studies of the recombination of OH with NO2: Vibrational deactivation, isotopic scrambling and product isomer branching ratios. Faraday Discussions 130: 125-151. Find this resource Stephenson, T.A., I.M. Konen, E.X.J. Li and M.I. Lester. 2005. Second OH overtone excitation and statistical dissociation dynamics of peroxynitrous acid. Journal of Chemical Physics 123: 204318. Find this resource Stephenson, T.A., T.V. Tscherbul, A.A. Buchachenko, M.E. Akopyan, S.A. Poretsky, and A.M. Pravilov. 2004. Collision-induced non-adiabatic transitions between the ion-pair states of molecular iodine: A challenge for experiment and theory. Physical Chemistry Chemical Physics 6 (13): 3201-3214. Find this resource Stephenson, T.A. and P.P. Chandra. 2004. Franck-Condon effects in collision-induced electronic energy transfer: I2(E;v=1,2)+He,Ar. Journal of Chemical Physics 121 (7): 2985-2991. Find this resource Stephenson, T.A., M.L. Morton, L.J. Butler, and F. Qi. 2002. C-CI bond fission, Hcl elimination, and secondary radical decomposition in the 193 Nm photodissociation of allyl chloride. Journal of Chemical Physics 116 (7): 2763-2775. Find this resource Stephenson, T.A., C.J. Fecko, and M.A. Freedman. 2002. Collision-induced electronic energy transfer from V=0 of the E(0+g) ion-pair state in I2: Collisions with He and Ar. Journal of Chemical Physics 116 (4): 1361-1369. Find this resource Stephenson, T.A., C.J. Fecko, and M.A. Freedman. 2001. Collision-induced electronic energy transfer from v = 0 of the E(0g+) ion-pair state in I2: Collisions with I2(X). Journal of Chemical Physics 115 (9): 4132-4138. Find this resource Stephenson, T.A. and N. Halberstadt. 2000. Quantum calculations on the vibrational predissociation of NeBr2: Evidence for continuum resonances. Journal of Chemical Physics 112 (5): 2265-2273. Find this resource Judith G. Voet, Professor EmeritaVoet, J.G. and D. Voet. 2007. We have a new publisher: John Wiley and Sons. Biochemistry and Molecular Biology Education 35 (1): 1. Find this resource Voet, J.G., D. Voet, and C.W. Pratt. 2006. Fundamentals of biochemistry: Life at the molecular level. 2nd ed. Hoboken, NJ: Wiley. Find this resource Voet, J.G. 2006. The American Society for Biochemistry and Molecular Biology interest in education. Biochemistry and Molecular Biology Education 34 (2): 65. Find this resource Voet, J.G. and D. Voet. 2004. Biochemistry. 3rd ed. Hoboken, NJ: Wiley. Find this resource Voet, J.G. and D. Voet. 2002. A new year and a new publisher. Biochemistry and Molecular Biology Education 30 (1): 1-2. Find this resource Voet, J.G., D. Voet, and C.W. Pratt. 2002. Fundamentals of biochemistry. Upgrade ed. New York: Wiley. Find this resource Voet, J.G., R.D. Madder, C.Y. Kim, P.P. Chandra, J.B. Doyon, T.A. Baird, C.A. Fierke, D.W. Christianson, and A. Jain. 2002. Twisted amides inferred from QSAR analysis of hydrophobicity and electronic effects on the affinity of flouroaromatic inhibitors of carbonic anhydrase. Journal of Organic Chemistry 67 (2): 582-584. Find this resource Voet, J.G. 2001. Bambed to become an Asbmb/lubmb joint venture in January 2002. Biochemistry and Molecular Biology Education 29 (6): 221. Find this resource Voet, J.G., D. Voet, and C.W. Pratt. 2001. Fundamentals of biochemistry. 2nd upgrade ed. New York: Wiley. Find this resource Voet, J.G., D.J.T. Porter, and H.J. Bright. 2000. Active site generation of a protonically unstable suicide substrate from a stable precursor: Glucose oxidase and dibromonitromethane. Biochemistry 39 (38): 11808-11817. Find this resource Voet, J.G., R.D. Madder, and A. Jain. 2000. Determining the role of substituent effects in the binding of fluorinated benzenesulfonamides to carbonic anhydrase using microemulsion electrokinetic chromatography. Biochemistry 39 (6): 23. Find this resource Voet, J.G., D. Kraut, H. Goff, R.K. Pai, N.A. Hosea, I. Silman, J.L. Sussman, and P. Taylor. 2000. Inactivation studies of acetylcholinesterase with phenylmethylsulfonyl fluoride. Molecular Pharmacology 57 (6): 1243-1248. Find this resource Voet, J.G., J.B. Doyon, E.A.M. Hansen, C.Y. Kim, J.S. Chang, D.W. Christianson, R.D. Madder, T.A. Baird, Jr, C.A. Fierke, and A. Jain. 2000. Linear free energy relationships implicate three modes of binding for fluoroaromatic inhibitors to a mutant of carbonic anhydrase II. Organic Letters 2 (9): 1189-1192. Find this resource Voet, J.G., D. Voet, and C.W. Pratt. 1999. Fundamentals of biochemistry. 1st ed. New York: Wiley. Find this resource Voet, J.G., D. Voet, and C.W. Pratt. 1999. Student companion to accompany Fundamentals of biochemistry. New York: Wiley. Find this resource Liliya A. Yatsunyk, Assistant ProfessorYatsunyk, L.A., L. Banci, I. Bertini, F. Cantini, and A.C. Rosenzweig. 2008. Metal binding domains 3 and 4 of the Wilson disease protein: Solution structure and interaction with the copper(I) chaperone HAH1. Biochemistry 47 (28): 7423-7429. Find this resource Yatsunyk, L.A., J.J. Benítez, A.M. Keller, P. Ochieng, D.L. Huffman, A.C. Rosenzweig, and P. Chen. 2008. Probing transient copper chaperone–Wilson disease protein interactions at the single-molecule level with nanovesicle trapping. Journal of the American Chemical Society 130 (8): 2446-2447. Find this resource Yatsunyk, L.A., J.A. Easton, L.R. Kim, S.A. Sugarbaker, B. Bennett, R.M. Breece, I.I. Vorontsov, D.L. Tierney, M.W. Crowder, and A.C. Rosenzweig. 2008. Structure and metal binding properties of ZnuA, a periplasmic zinc transporter from Escherichia coli. Journal of Biological Inorganic Chemistry 13 (2): 271-288. Find this resource Yatsunyk, L.A. and A.C. Rosenzweig. 2007. Cu(I) binding and transfer by the N terminus of the Wilson disease protein. Journal of Biological Chemistry 282 (12): 8622-8631. Find this resource Yatsunyk, L.A., K.E. Wheeler, J.M. Nocek, D.A. Cull, A.C. Rosenzweig, and B.M. Hoffman. 2007. Dynamic docking of cytochrome b5 with myoglobin and α-hemoglobin: Heme-neutralization "squares" and the binding of electron-transfer-reactive configurations. Journal of the American Chemical Society 129 (13): 3906-3917. Find this resource |